A B C D E F G H I J L M N O P Q R S T U V W X

T

test(File, File) - Method in class org.gcn.plinguacore.simulator.cellLike.stochastic.StochasticTester

Performs the test, by running the simulator numberOfRuns times

testResults() - Method in class org.gcn.plinguacore.simulator.cellLike.stochastic.StochasticTester

TissueLikeConfiguration - Class in org.gcn.plinguacore.util.psystem.tissueLike

TissueLikeCreateSimulator - Class in org.gcn.plinguacore.simulator.tissueLike

TissueLikeCreateSimulator(String) - Constructor for class org.gcn.plinguacore.simulator.tissueLike.TissueLikeCreateSimulator

TissueLikeEnvironment - Class in org.gcn.plinguacore.util.psystem.tissueLike.membrane

TissueLikeMembrane - Class in org.gcn.plinguacore.util.psystem.tissueLike.membrane

TissueLikeMembraneStructure - Class in org.gcn.plinguacore.util.psystem.tissueLike.membrane

TissueLikeMembraneStructure(MembraneStructure) - Constructor for class org.gcn.plinguacore.util.psystem.tissueLike.membrane.TissueLikeMembraneStructure

TissueLikePsystem - Class in org.gcn.plinguacore.util.psystem.tissueLike

This class represents P-systems belonging to tissue-like group

TissueLikePsystem() - Constructor for class org.gcn.plinguacore.util.psystem.tissueLike.TissueLikePsystem

TissueLikePsystemFactory - Class in org.gcn.plinguacore.simulator.tissueLike

TissueLikeRule - Class in org.gcn.plinguacore.util.psystem.rule.tissueLike

TissueLikeRuleFactory - Class in org.gcn.plinguacore.util.psystem.rule.tissueLike

TissueLikeRuleFactory() - Constructor for class org.gcn.plinguacore.util.psystem.rule.tissueLike.TissueLikeRuleFactory

TissueLikeSimulator - Class in org.gcn.plinguacore.simulator.tissueLike

TissueLikeSimulator(Psystem) - Constructor for class org.gcn.plinguacore.simulator.tissueLike.TissueLikeSimulator

toArray() - Method in class org.gcn.plinguacore.util.HashInfiniteMultiSet

toArray(T[]) - Method in class org.gcn.plinguacore.util.HashInfiniteMultiSet

toArray() - Method in class org.gcn.plinguacore.util.HashMultiSet

toArray(T[]) - Method in class org.gcn.plinguacore.util.HashMultiSet

toArray() - Method in class org.gcn.plinguacore.util.InmutableMultiSet

toArray(T[]) - Method in class org.gcn.plinguacore.util.InmutableMultiSet

toArray() - Method in class org.gcn.plinguacore.util.psystem.rule.RulesSet

toArray(T[]) - Method in class org.gcn.plinguacore.util.psystem.rule.RulesSet

toArray() - Method in class org.gcn.plinguacore.util.UnionSet

toArray(T[]) - Method in class org.gcn.plinguacore.util.UnionSet

tokenImage - Variable in exception org.gcn.plinguacore.parser.input.plingua.ParseException

This is a reference to the "tokenImage" array of the generated parser within which the parse error occurred.

tokenImage - Static variable in interface org.gcn.plinguacore.parser.input.plingua.PlinguaJavaCcParserConstants

toString() - Method in class org.gcn.plinguacore.parser.input.messages.InputParserAbstractMsg

toString() - Method in class org.gcn.plinguacore.parser.input.messages.InputParserDecoratorMsg

toString() - Method in class org.gcn.plinguacore.parser.input.messages.MsgInterval

toString() - Method in class org.gcn.plinguacore.simulator.cellLike.stochastic.StochasticSimulator.Reaction

toString() - Method in class org.gcn.plinguacore.simulator.CreateSimulator

toString() - Method in class org.gcn.plinguacore.util.GeneString

toString() - Method in class org.gcn.plinguacore.util.HashInfiniteMultiSet

toString() - Method in class org.gcn.plinguacore.util.HashMultiSet

toString() - Method in class org.gcn.plinguacore.util.IndexedPriorityQueue.Node

toString() - Method in class org.gcn.plinguacore.util.IndexedPriorityQueue

toString() - Method in class org.gcn.plinguacore.util.InmutableMultiSet

toString() - Method in class org.gcn.plinguacore.util.Pair

toString() - Method in class org.gcn.plinguacore.util.psystem.ActivationSets

toString() - Method in class org.gcn.plinguacore.util.psystem.AlphabetObject

toString() - Method in class org.gcn.plinguacore.util.psystem.cellLike.membrane.CellLikeMembrane

Gets a String with a representation of the membrane in P-Lingua format

toString() - Method in class org.gcn.plinguacore.util.psystem.Configuration

toString() - Method in class org.gcn.plinguacore.util.psystem.Label

toString() - Method in class org.gcn.plinguacore.util.psystem.membrane.Membrane

toString() - Method in interface org.gcn.plinguacore.util.psystem.membrane.MembraneStructure

toString() - Method in class org.gcn.plinguacore.util.psystem.Psystem

toString() - Method in class org.gcn.plinguacore.util.psystem.rule.AbstractRule

toString() - Method in class org.gcn.plinguacore.util.psystem.rule.HandRule

toString() - Method in class org.gcn.plinguacore.util.psystem.rule.OuterRuleMembrane

toString() - Method in class org.gcn.plinguacore.util.psystem.rule.RightHandRule

toString(boolean) - Method in class org.gcn.plinguacore.util.psystem.rule.RightHandRule

toString() - Method in class org.gcn.plinguacore.util.psystem.rule.RulesSet

toString() - Method in class org.gcn.plinguacore.util.psystem.rule.tissueLike.DoubleCommunicationTissueLikeRule

toString() - Method in class org.gcn.plinguacore.util.psystem.tissueLike.membrane.TissueLikeMembraneStructure

toString() - Method in class org.gcn.plinguacore.util.UnionSet

TransitionCreateSimulator - Class in org.gcn.plinguacore.simulator.cellLike.transition

TransitionCreateSimulator(String) - Constructor for class org.gcn.plinguacore.simulator.cellLike.transition.TransitionCreateSimulator

TransitionPsystemFactory - Class in org.gcn.plinguacore.simulator.cellLike.transition

This class is intended to give support for P-systems in which only membrane communication, evolution and cooperation are allowed

TransitionSimulator - Class in org.gcn.plinguacore.simulator.cellLike.transition

A simulator for transition and symport/antiport P systems

TransitionSimulator(Psystem) - Constructor for class org.gcn.plinguacore.simulator.cellLike.transition.TransitionSimulator

treeRepresentation(int) - Method in class org.gcn.plinguacore.util.IndexedPriorityQueue.Node

Triple<E,T,L> - Class in org.gcn.plinguacore.util

This class represents a triple of generic types E, T and L

Triple(E, T, L) - Constructor for class org.gcn.plinguacore.util.Triple