Serialized Form

Package org.gcn.plinguacore.parser.input.plingua
- Class org.gcn.plinguacore.parser.input.plingua.ParseException extends java.lang.Exception implements Serializable
  - Serialized Fields
    - specialConstructor
```
boolean specialConstructor
```
      This variable determines which constructor was used to create this object and thereby affects the semantics of the "getMessage" method (see below).
    - currentToken
```
Token currentToken
```
      This is the last token that has been consumed successfully. If this object has been created due to a parse error, the token followng this token will (therefore) be the first error token.
    - expectedTokenSequences
```
int[][] expectedTokenSequences
```
      Each entry in this array is an array of integers. Each array of integers represents a sequence of tokens (by their ordinal values) that is expected at this point of the parse.
    - tokenImage
```
java.lang.String[] tokenImage
```
      This is a reference to the "tokenImage" array of the generated parser within which the parse error occurred. This array is defined in the generated ...Constants interface.
    - eol
```
java.lang.String eol
```
      The end of line string for this machine.
- Class org.gcn.plinguacore.parser.input.plingua.PlinguaSemanticsException extends ParseException implements Serializable
  
  serialVersionUID:
  
  -4750534933505868248L
  - Serialized Fields
    - error
```
InputParserMsg error
```
Package org.gcn.plinguacore.simulator
- Class org.gcn.plinguacore.simulator.AbstractSelectionExecutionSimulator extends AbstractSimulator implements Serializable
  
  serialVersionUID:
  
  1997974622465213429L
  - Serialized Fields
    - firstTime
```
boolean firstTime
```
    - selectedRules
```
java.util.Map<K,V> selectedRules
```
- Class org.gcn.plinguacore.simulator.AbstractSimulator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -144569770489973320L
  - Serialized Fields
    - time
```
boolean time
```
    - verbosity
```
int verbosity
```
    - date
```
java.util.Date date
```
    - currentConfig
```
Configuration currentConfig
```
- Class org.gcn.plinguacore.simulator.AlternativeStepsSupportedSimulator extends DecoratorSimulator implements Serializable
  
  serialVersionUID:
  
  4933648667083874575L
- Class org.gcn.plinguacore.simulator.CopyOfAbstractSimulator extends AbstractSimulator implements Serializable
  
  serialVersionUID:
  
  8223592697775323152L
  - Serialized Fields
    - stableCurrentConfig
```
Configuration stableCurrentConfig
```
- Class org.gcn.plinguacore.simulator.DecoratorSimulator extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - decorated
```
ISimulator decorated
```
- Class org.gcn.plinguacore.simulator.ElementFileStream extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - element
```
java.lang.Object element
```
    - outputStream
```
java.io.ObjectOutputStream outputStream
```
    - inputStream
```
java.io.ObjectInputStream inputStream
```
    - fileRoute
```
java.lang.String fileRoute
```
- Class org.gcn.plinguacore.simulator.StepBackSupportedSimulator extends DecoratorSimulator implements Serializable
  
  serialVersionUID:
  
  -6761190875799266639L
  - Serialized Fields
    - configurationStack
```
java.util.Stack<E> configurationStack
```
Package org.gcn.plinguacore.simulator.cellLike
- Class org.gcn.plinguacore.simulator.cellLike.CellLikeSimulator extends AbstractSelectionExecutionSimulator implements Serializable
  
  serialVersionUID:
  
  2539727644482041974L
Package org.gcn.plinguacore.simulator.cellLike.activeMembranes
- Class org.gcn.plinguacore.simulator.cellLike.activeMembranes.ActiveMembranesSimulator extends CellLikeSimulator implements Serializable
  
  serialVersionUID:
  
  -7363771600223333693L
  - Serialized Fields
    - initialConfig
```
boolean initialConfig
```
    - onlyEvolutionPermitted
```
java.util.Set<E> onlyEvolutionPermitted
```
Package org.gcn.plinguacore.simulator.cellLike.probabilistic
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.AbstractDnd2Sim extends AbstractSimulator implements Serializable
  
  serialVersionUID:
  
  -8435837428038650914L
  - Serialized Fields
    - K
```
int K
```
    - threadsList
```
java.util.List<E> threadsList
```
    - Cp
```
Configuration Cp
```
    - multiThread
```
boolean multiThread
```
    - rules
```
boolean rules
```
    - stopThreads
```
boolean stopThreads
```
    - firstTime
```
boolean firstTime
```
    - selection
```
ThreadBarrier selection
```
    - execution
```
ThreadBarrier execution
```
    - universalClock
```
ThreadBarrier universalClock
```
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.AbstractDndProbabilisticSimulator extends AbstractSimulator implements Serializable
  
  serialVersionUID:
  
  -8435837428038650914L
  - Serialized Fields
    - K
```
int K
```
    - threadsList
```
java.util.List<E> threadsList
```
    - Cp
```
Configuration Cp
```
    - multiThread
```
boolean multiThread
```
    - rules
```
boolean rules
```
    - stopThreads
```
boolean stopThreads
```
    - firstTime
```
boolean firstTime
```
    - selection
```
ThreadBarrier selection
```
    - execution
```
ThreadBarrier execution
```
    - universalClock
```
ThreadBarrier universalClock
```
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.AbstractProbabilisticSimulator extends CellLikeSimulator implements Serializable
  
  serialVersionUID:
  
  917064514139461645L
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.BinomialProbabilisticSimulator extends AbstractProbabilisticSimulator implements Serializable
  
  serialVersionUID:
  
  -8850790290242455072L
  - Serialized Fields
    - activations
```
java.util.Map<K,V> activations
```
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.Dnd2SimParallel extends AbstractDnd2Sim implements Serializable
  
  serialVersionUID:
  
  -1692846588582480590L
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.Dnd2SimSeq extends AbstractDnd2Sim implements Serializable
  
  serialVersionUID:
  
  -4948077506481513786L
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.Dnd3ProbabilisticSimulator extends AbstractProbabilisticSimulator implements Serializable
  
  serialVersionUID:
  
  -8435837428038650914L
  - Serialized Fields
    - bloques
```
java.util.List<E> bloques
```
      Deprecated.
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.Dnd4ProbabilisticSimulator extends AbstractProbabilisticSimulator implements Serializable
  
  serialVersionUID:
  
  -3375087211519864303L
  - Serialized Fields
    - matrix
```
DndpMatrix matrix
```
    - maxIterations
```
int maxIterations
```
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.DndProbabilisticSimulatorParallel extends AbstractDndProbabilisticSimulator implements Serializable
  
  serialVersionUID:
  
  -1409518594281930534L
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.DndProbabilisticSimulatorSequential extends AbstractDndProbabilisticSimulator implements Serializable
  
  serialVersionUID:
  
  -7723001691638948767L
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.NoMaximalSim extends AbstractProbabilisticSimulator implements Serializable
  
  serialVersionUID:
  
  -3990469922898085357L
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.ProbabilisticSimulator extends AbstractProbabilisticSimulator implements Serializable
  
  serialVersionUID:
  
  -7427347014964937489L
  - Serialized Fields
    - probabilities
```
java.util.Map<K,V> probabilities
```
Package org.gcn.plinguacore.simulator.cellLike.probabilistic.dcba
- Class org.gcn.plinguacore.simulator.cellLike.probabilistic.dcba.DCBAProbabilisticSimulator extends AbstractProbabilisticSimulator implements Serializable
  
  serialVersionUID:
  
  5683365879577783767L
  - Serialized Fields
    - matrix
```
DynamicMatrix matrix
```
    - selectedRules
```
long selectedRules
```
    - showRules
```
boolean showRules
```
    - writeToFile
```
boolean writeToFile
```
    - executionStep
```
int executionStep
```
Package org.gcn.plinguacore.simulator.cellLike.transition
- Class org.gcn.plinguacore.simulator.cellLike.transition.NonDeterministicTransitionSimulator extends CellLikeSimulator implements Serializable
  
  serialVersionUID:
  
  290211051490843577L
- Class org.gcn.plinguacore.simulator.cellLike.transition.NonDeterministicTransitionSimulator2 extends CellLikeSimulator implements Serializable
  
  serialVersionUID:
  
  290211051490843577L
- Class org.gcn.plinguacore.simulator.cellLike.transition.TransitionSimulator extends CellLikeSimulator implements Serializable
  
  serialVersionUID:
  
  5914531846669504917L
Package org.gcn.plinguacore.simulator.spiking
- Class org.gcn.plinguacore.simulator.spiking.SpikingSimulator extends AbstractSelectionExecutionSimulator implements Serializable
  
  serialVersionUID:
  
  6170733461524439912L
  - Serialized Fields
    - asynch
```
int asynch
```
    - sequential
```
int sequential
```
    - asynchValidConfiguration
```
java.util.Map<K,V> asynchValidConfiguration
```
    - executionStep
```
long executionStep
```
    - division
```
java.util.ArrayList<E> division
```
    - budding
```
java.util.ArrayList<E> budding
```
    - spiking
```
java.util.ArrayList<E> spiking
```
    - writeToFile
```
boolean writeToFile
```
    - lastExecutionStep
```
boolean lastExecutionStep
```
    - showBinarySequence
```
boolean showBinarySequence
```
    - showNaturalSequence
```
java.util.ArrayList<E> showNaturalSequence
```
    - showSummatories
```
boolean showSummatories
```
Package org.gcn.plinguacore.simulator.tissueLike
- Class org.gcn.plinguacore.simulator.tissueLike.TissueLikeSimulator extends AbstractSelectionExecutionSimulator implements Serializable
  
  serialVersionUID:
  
  -1556761252509150318L
  - Serialized Fields
    - state
```
int state
```
    - communications
```
java.util.List<E> communications
```
    - membranesToCommunicate
```
java.util.Set<E> membranesToCommunicate
```
    - membranesToDivide
```
java.util.Map<K,V> membranesToDivide
```
- Class org.gcn.plinguacore.simulator.tissueLike.TSCSSimulator extends AbstractSelectionExecutionSimulator implements Serializable
  
  serialVersionUID:
  
  -1556761252509150318L
  - Serialized Fields
    - state
```
int state
```
    - communications
```
java.util.List<E> communications
```
    - membranesToCommunicate
```
java.util.Set<E> membranesToCommunicate
```
    - membranesToDivide
```
java.util.Map<K,V> membranesToDivide
```
Package org.gcn.plinguacore.util
- Class org.gcn.plinguacore.util.HashInfiniteMultiSet extends HashMultiSet<E> implements Serializable
  
  serialVersionUID:
  
  -6023263700543581160L
  - Serialized Fields
    - infiniteObjects
```
java.util.Set<E> infiniteObjects
```
- Class org.gcn.plinguacore.util.HashMultiSet extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  4265738367398769859L
  - Serialized Fields
    - entrySet
```
org.gcn.plinguacore.util.HashMultiSet.EntrySet entrySet
```
- Class org.gcn.plinguacore.util.IndexedPriorityQueue extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -7262509096684905459L
  - Serialized Fields
    - indexes
```
IndexedPriorityQueue.Node<T extends E>[] indexes
```
    - root
```
IndexedPriorityQueue.Node<T extends E> root
```
- Class org.gcn.plinguacore.util.IndexedPriorityQueue.Node extends java.lang.Object implements Serializable
  - Serialized Fields
    - i
```
int i
```
    - value
```
java.lang.Comparable<T> value
```
    - parent
```
IndexedPriorityQueue.Node<T extends E> parent
```
    - rightChild
```
IndexedPriorityQueue.Node<T extends E> rightChild
```
    - leftChild
```
IndexedPriorityQueue.Node<T extends E> leftChild
```
- Class org.gcn.plinguacore.util.InmutableMultiSet extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  3690031173844421012L
  - Serialized Fields
    - multiset
```
MultiSet<E> multiset
```
- Class org.gcn.plinguacore.util.Pair extends java.lang.Object implements Serializable
  - Serialized Fields
    - first
```
java.lang.Object first
```
    - second
```
java.lang.Object second
```
- Class org.gcn.plinguacore.util.PlinguaCoreException extends java.lang.Exception implements Serializable
  
  serialVersionUID:
  
  -3663466397732576408L
- Class org.gcn.plinguacore.util.PlinguaPanicError extends java.lang.Error implements Serializable
  
  serialVersionUID:
  
  8851024763551280228L
- Class org.gcn.plinguacore.util.RandomArrayList extends java.util.ArrayList<E> implements Serializable
  
  serialVersionUID:
  
  6028247731361474736L
- Class org.gcn.plinguacore.util.Triple extends Pair<E,T> implements Serializable
  - Serialized Fields
    - third
```
java.lang.Object third
```
Package org.gcn.plinguacore.util.check
- Class org.gcn.plinguacore.util.check.BaseCheck extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -3685134922361847876L
  - Serialized Fields
    - causes
```
java.util.List<E> causes
```
    - initializedCauses
```
boolean initializedCauses
```
- Class org.gcn.plinguacore.util.check.DecoratorCheck extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  339922718160092202L
  - Serialized Fields
    - decorated
```
org.gcn.plinguacore.util.check.InnerCheck<T> decorated
```
Package org.gcn.plinguacore.util.psystem
- Class org.gcn.plinguacore.util.psystem.AlphabetObject extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  4367150243594694785L
  - Serialized Fields
    - name
```
java.lang.String name
```
    - indexes
```
int[] indexes
```
    - strObj
```
java.lang.String strObj
```
- Class org.gcn.plinguacore.util.psystem.Configuration extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -6642873032924795615L
  - Serialized Fields
    - membraneStructure
```
MembraneStructure membraneStructure
```
    - number
```
int number
```
    - psystem
```
Psystem psystem
```
- Class org.gcn.plinguacore.util.psystem.Label extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  382343707864922136L
  - Serialized Fields
    - labelID
```
java.lang.String labelID
```
    - environmentID
```
java.lang.String environmentID
```
- Class org.gcn.plinguacore.util.psystem.Psystem extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  3801859310721771797L
  - Serialized Fields
    - rules
```
RulesSet rules
```
    - alphabet
```
java.util.SortedSet<E> alphabet
```
    - initialMultiSets
```
java.util.Map<K,V> initialMultiSets
```
    - firstMultiSet
```
MultiSet<E> firstMultiSet
```
    - secondMultiSet
```
MultiSet<E> secondMultiSet
```
    - membraneStructure
```
MembraneStructure membraneStructure
```
Package org.gcn.plinguacore.util.psystem.cellLike
- Class org.gcn.plinguacore.util.psystem.cellLike.CellLikeConfiguration extends Configuration implements Serializable
  
  serialVersionUID:
  
  5324665255482026462L
  - Serialized Fields
    - environment
```
MultiSet<E> environment
```
- Class org.gcn.plinguacore.util.psystem.cellLike.CellLikePsystem extends Psystem implements Serializable
  
  serialVersionUID:
  
  8332316133669389557L
Package org.gcn.plinguacore.util.psystem.cellLike.membrane
- Class org.gcn.plinguacore.util.psystem.cellLike.membrane.CellLikeMembrane extends ChangeableMembrane implements Serializable
  
  serialVersionUID:
  
  -6142935731109264452L
  - Serialized Fields
    - childMembranes
```
java.util.List<E> childMembranes
```
- Class org.gcn.plinguacore.util.psystem.cellLike.membrane.CellLikeNoSkinMembrane extends CellLikeMembrane implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - skinMembrane
```
CellLikeSkinMembrane skinMembrane
```
    - parentMembrane
```
CellLikeMembrane parentMembrane
```
- Class org.gcn.plinguacore.util.psystem.cellLike.membrane.CellLikeSkinMembrane extends CellLikeMembrane implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - nextId
```
int nextId
```
    - membranes
```
java.util.Map<K,V> membranes
```
Package org.gcn.plinguacore.util.psystem.checkPsystem
- Class org.gcn.plinguacore.util.psystem.checkPsystem.BaseCheckPsystem extends BaseCheck<Psystem> implements Serializable
  
  serialVersionUID:
  
  -6066387104689946842L
- Class org.gcn.plinguacore.util.psystem.checkPsystem.DecoratorCheckPsystem extends DecoratorCheck<Psystem> implements Serializable
  
  serialVersionUID:
  
  3886333432897639782L
Package org.gcn.plinguacore.util.psystem.checkPsystem.specificCheckPsystem
- Class org.gcn.plinguacore.util.psystem.checkPsystem.specificCheckPsystem.CompleteProbabilities extends DecoratorCheckPsystem implements Serializable
  
  serialVersionUID:
  
  -8921870457272723574L
  - Serialized Fields
    - causeRules
```
java.util.List<E> causeRules
```
- Class org.gcn.plinguacore.util.psystem.checkPsystem.specificCheckPsystem.ConsistentRules extends DecoratorCheckPsystem implements Serializable
  
  serialVersionUID:
  
  -3213988448397373493L
  - Serialized Fields
    - causeRules
```
java.util.List<E> causeRules
```
Package org.gcn.plinguacore.util.psystem.membrane
- Class org.gcn.plinguacore.util.psystem.membrane.ChangeableMembrane extends Membrane implements Serializable
  
  serialVersionUID:
  
  -8308332619574555993L
  - Serialized Fields
    - id
```
int id
```
- Class org.gcn.plinguacore.util.psystem.membrane.Membrane extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  979202030107031549L
  - Serialized Fields
    - multiSet
```
MultiSet<E> multiSet
```
    - label
```
Label label
```
    - charge
```
byte charge
```
Package org.gcn.plinguacore.util.psystem.rule
- Class org.gcn.plinguacore.util.psystem.rule.AbstractRule extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  -2223028108798909376L
  - Serialized Fields
    - handCorrespondence
```
InnerRuleMembrane[] handCorrespondence
```
    - dissolves
```
boolean dissolves
```
    - leftHandRule
```
LeftHandRule leftHandRule
```
    - rightHandRule
```
RightHandRule rightHandRule
```
    - newMembranes
```
java.util.List<E> newMembranes
```
    - ruleId
```
long ruleId
```
- Class org.gcn.plinguacore.util.psystem.rule.HandRule extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  5525186671845193265L
  - Serialized Fields
    - multiset
```
MultiSet<E> multiset
```
    - outerMembrane
```
OuterRuleMembrane outerMembrane
```
- Class org.gcn.plinguacore.util.psystem.rule.InnerRuleMembrane extends Membrane implements Serializable
  
  serialVersionUID:
  
  -4060305358392778861L
- Class org.gcn.plinguacore.util.psystem.rule.LeftHandRule extends HandRule implements Serializable
  
  serialVersionUID:
  
  931919701324713064L
- Class org.gcn.plinguacore.util.psystem.rule.OuterRuleMembrane extends Membrane implements Serializable
  
  serialVersionUID:
  
  6694799090774398321L
  - Serialized Fields
    - innerMembranes
```
java.util.List<E> innerMembranes
```
- Class org.gcn.plinguacore.util.psystem.rule.RightHandRule extends HandRule implements Serializable
  
  serialVersionUID:
  
  4916985606491545835L
  - Serialized Fields
    - secondOuterMembrane
```
OuterRuleMembrane secondOuterMembrane
```
- Class org.gcn.plinguacore.util.psystem.rule.RulesSet extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  244011999390422931L
  - Serialized Fields
    - checkRule
```
CheckRule checkRule
```
    - rules
```
java.util.Map<K,V> rules
```
    - rulesByEnv
```
java.util.Map<K,V> rulesByEnv
```
    - allRules
```
java.util.Set<E> allRules
```
    - alphabet
```
java.util.SortedSet<E> alphabet
```
Package org.gcn.plinguacore.util.psystem.rule.checkRule
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.DecoratorCheckRule extends java.lang.Object implements Serializable
  
  serialVersionUID:
  
  339922718160092202L
  - Serialized Fields
    - decorated
```
org.gcn.plinguacore.util.psystem.rule.checkRule.InnerCheckRule decorated
```
Package org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.Constant extends NoConstant implements Serializable
  
  serialVersionUID:
  
  -165317059971834710L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.MultiEnvironment extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  3856117125403597907L
  - Serialized Fields
    - error
```
int error
```
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoCharges extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  5023790016455964242L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoConstant extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -2136701933336259351L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoCooperation extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -6167535217122687596L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoCooperationWithDivision extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  9147605245125836526L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoCreation extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -4964414927791023114L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoDifferentMainLabels extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -2799599828518072462L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoDissolution extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -3122646462770471407L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoDivision extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -2822148379585645980L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoEmptyLeftMultiSet extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  2521796773673522199L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoEvolution extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  9147605245125836526L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoGeneStrings extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -4702673900938431959L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoLeftExternalMultiSet extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -2202497668908299011L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoLeftExternalMultiSetWithCreation extends org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.AbstractNoLeftExternalMultiSet implements Serializable
  
  serialVersionUID:
  
  752298869777105644L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoLeftExternalMultiSetWithDissolution extends org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.AbstractNoLeftExternalMultiSet implements Serializable
  
  serialVersionUID:
  
  -5110347715619492401L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoLeftExternalMultiSetWithDivision extends org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.AbstractNoLeftExternalMultiSet implements Serializable
  
  serialVersionUID:
  
  -7846584198238362209L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoLeftInnerMembranes extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  1387261979751334794L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoLeftRepeatedLabels extends NoRepeatedLabels implements Serializable
  
  serialVersionUID:
  
  2814803775414901272L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoMultipleProduction extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -2863456471230961641L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoMultipleProductionWithDivision extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  9147605245125836526L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoPriority extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -8215412423729798727L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoRepeatedLabels extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -8267221205826990188L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoRightExternalMultiSet extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -4619746450626196505L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoRightInnerMembranes extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  2353523152452738877L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NoRightRepeatedLabels extends NoRepeatedLabels implements Serializable
  
  serialVersionUID:
  
  6671029857387676280L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.NotAllEmptyMultiSet extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  -3963693050501443891L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.Ratio extends Constant implements Serializable
  
  serialVersionUID:
  
  2198306913397498983L
- Class org.gcn.plinguacore.util.psystem.rule.checkRule.specificCheckRule.SymmetricCommunication extends DecoratorCheckRule implements Serializable
  
  serialVersionUID:
  
  8634047200621525016L
Package org.gcn.plinguacore.util.psystem.rule.spiking
- Class org.gcn.plinguacore.util.psystem.rule.spiking.SpikingRule extends AbstractRule implements Serializable
  
  serialVersionUID:
  
  4165214584338096187L
  - Serialized Fields
    - regExp
```
java.util.regex.Pattern regExp
```
    - delay
```
long delay
```
    - efficiencyAttributesProcessed
```
boolean efficiencyAttributesProcessed
```
    - isFiring
```
boolean isFiring
```
    - isForgetting
```
boolean isForgetting
```
    - isBudding
```
boolean isBudding
```
    - isDivision
```
boolean isDivision
```
    - buddingdivision
```
java.lang.String buddingdivision
```
    - ruleSpikingString
```
java.lang.String ruleSpikingString
```
    - ruleSpikingStringSize
```
long ruleSpikingStringSize
```
    - rightHandRuleSpikingStringSize
```
long rightHandRuleSpikingStringSize
```
    - leftObject
```
java.lang.String leftObject
```
    - rightObject
```
java.lang.String rightObject
```
Package org.gcn.plinguacore.util.psystem.rule.tissueLike
- Class org.gcn.plinguacore.util.psystem.rule.tissueLike.DoubleCommunicationTissueLikeRule extends TissueLikeRule implements Serializable
  
  serialVersionUID:
  
  5601163359552027963L
  - Serialized Fields
    - communications
```
java.util.List<E> communications
```
    - executions
```
long executions
```
- Class org.gcn.plinguacore.util.psystem.rule.tissueLike.TissueLikeRule extends AbstractRule implements Serializable
  
  serialVersionUID:
  
  -2311858756048522881L
- Class org.gcn.plinguacore.util.psystem.rule.tissueLike.TSCSRule extends AbstractRule implements Serializable
  
  serialVersionUID:
  
  -2311858756048522881L
Package org.gcn.plinguacore.util.psystem.spiking
- Class org.gcn.plinguacore.util.psystem.spiking.SpikingConfiguration extends Configuration implements Serializable
  
  serialVersionUID:
  
  -8550282887814471902L
- Class org.gcn.plinguacore.util.psystem.spiking.SpikingPsystem extends Psystem implements Serializable
  
  serialVersionUID:
  
  -6533958106892732814L
Package org.gcn.plinguacore.util.psystem.spiking.membrane
- Class org.gcn.plinguacore.util.psystem.spiking.membrane.SpikingEnvironment extends SpikingMembrane implements Serializable
  
  serialVersionUID:
  
  5585656570644646361L
  - Serialized Fields
    - binarySpikeTrain
```
java.util.HashMap<K,V> binarySpikeTrain
```
    - naturalSpikeTrain
```
java.util.HashMap<K,V> naturalSpikeTrain
```
    - inputSequence
```
java.util.HashMap<K,V> inputSequence
```
    - stepsTaken
```
long stepsTaken
```
- Class org.gcn.plinguacore.util.psystem.spiking.membrane.SpikingMembrane extends ChangeableMembrane implements Serializable
  
  serialVersionUID:
  
  -991479572199736842L
  - Serialized Fields
    - stepsToOpen
```
long stepsToOpen
```
    - selectedRule
```
SpikingRule selectedRule
```
    - structure
```
SpikingMembraneStructure structure
```
    - buddingdivision
```
boolean buddingdivision
```
    - object
```
java.lang.String object
```
    - efficiencyAttributesProcessed
```
boolean efficiencyAttributesProcessed
```
    - membraneSpikingString
```
java.lang.String membraneSpikingString
```
    - membraneSpikingStringSize
```
long membraneSpikingStringSize
```
Package org.gcn.plinguacore.util.psystem.tissueLike
- Class org.gcn.plinguacore.util.psystem.tissueLike.TissueLikeConfiguration extends Configuration implements Serializable
  
  serialVersionUID:
  
  1762892867128733623L
- Class org.gcn.plinguacore.util.psystem.tissueLike.TissueLikePsystem extends Psystem implements Serializable
  
  serialVersionUID:
  
  2290929626246752890L
Package org.gcn.plinguacore.util.psystem.tissueLike.membrane
- Class org.gcn.plinguacore.util.psystem.tissueLike.membrane.TissueLikeEnvironment extends TissueLikeMembrane implements Serializable
  
  serialVersionUID:
  
  -9069058949375353260L
- Class org.gcn.plinguacore.util.psystem.tissueLike.membrane.TissueLikeMembrane extends ChangeableMembrane implements Serializable
  
  serialVersionUID:
  
  4331622171073550025L
  - Serialized Fields
    - structure
```
TissueLikeMembraneStructure structure
```

Serialized Form

Package org.gcn.plinguacore.parser.input.plingua

Class org.gcn.plinguacore.parser.input.plingua.ParseException extends java.lang.Exception implements Serializable

Serialized Fields

specialConstructor

currentToken

expectedTokenSequences

tokenImage

eol

Class org.gcn.plinguacore.parser.input.plingua.PlinguaSemanticsException extends ParseException implements Serializable

Serialized Fields

error

Package org.gcn.plinguacore.simulator

Class org.gcn.plinguacore.simulator.AbstractSelectionExecutionSimulator extends AbstractSimulator implements Serializable

Serialized Fields

firstTime

selectedRules

Class org.gcn.plinguacore.simulator.AbstractSimulator extends java.lang.Object implements Serializable

Serialized Fields

time

verbosity

date

currentConfig

Class org.gcn.plinguacore.simulator.AlternativeStepsSupportedSimulator extends DecoratorSimulator implements Serializable

Class org.gcn.plinguacore.simulator.CopyOfAbstractSimulator extends AbstractSimulator implements Serializable

Serialized Fields

stableCurrentConfig

Class org.gcn.plinguacore.simulator.DecoratorSimulator extends java.lang.Object implements Serializable

Serialized Fields

decorated

Class org.gcn.plinguacore.simulator.ElementFileStream extends java.lang.Object implements Serializable

Serialized Fields

element

outputStream

inputStream

fileRoute

Class org.gcn.plinguacore.simulator.StepBackSupportedSimulator extends DecoratorSimulator implements Serializable

Serialized Fields

configurationStack

Package org.gcn.plinguacore.simulator.cellLike

Class org.gcn.plinguacore.simulator.cellLike.CellLikeSimulator extends AbstractSelectionExecutionSimulator implements Serializable

Package org.gcn.plinguacore.simulator.cellLike.activeMembranes

Class org.gcn.plinguacore.simulator.cellLike.activeMembranes.ActiveMembranesSimulator extends CellLikeSimulator implements Serializable

Serialized Fields

initialConfig

onlyEvolutionPermitted

Package org.gcn.plinguacore.simulator.cellLike.probabilistic

Class org.gcn.plinguacore.simulator.cellLike.probabilistic.AbstractDnd2Sim extends AbstractSimulator implements Serializable

Serialized Fields

K

threadsList

Cp

multiThread

rules

stopThreads

firstTime

selection

execution

universalClock

Class org.gcn.plinguacore.simulator.cellLike.probabilistic.AbstractDndProbabilisticSimulator extends AbstractSimulator implements Serializable

Serialized Fields

K

threadsList

Cp

multiThread

rules

stopThreads

firstTime

selection

execution

universalClock

Class org.gcn.plinguacore.simulator.cellLike.probabilistic.AbstractProbabilisticSimulator extends CellLikeSimulator implements Serializable

Class org.gcn.plinguacore.simulator.cellLike.probabilistic.BinomialProbabilisticSimulator extends AbstractProbabilisticSimulator implements Serializable

Serialized Fields

activations

Class org.gcn.plinguacore.simulator.cellLike.probabilistic.Dnd2SimParallel extends AbstractDnd2Sim implements Serializable

Class org.gcn.plinguacore.simulator.cellLike.probabilistic.Dnd2SimSeq extends AbstractDnd2Sim implements Serializable

Class org.gcn.plinguacore.simulator.cellLike.probabilistic.Dnd3ProbabilisticSimulator extends AbstractProbabilisticSimulator implements Serializable

Serialized Fields

bloques