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T

test(File, File) - Method in class org.gcn.plinguacore.simulator.cellLike.stochastic.StochasticTester
Performs the test, by running the simulator numberOfRuns times
testResults() - Method in class org.gcn.plinguacore.simulator.cellLike.stochastic.StochasticTester
 
toArray() - Method in class org.gcn.plinguacore.util.HashMultiSet
 
toArray(T[]) - Method in class org.gcn.plinguacore.util.HashMultiSet
 
toArray() - Method in class org.gcn.plinguacore.util.InmutableMultiSet
 
toArray(T[]) - Method in class org.gcn.plinguacore.util.InmutableMultiSet
 
toArray() - Method in class org.gcn.plinguacore.util.psystem.rule.RulesSet
 
toArray(T[]) - Method in class org.gcn.plinguacore.util.psystem.rule.RulesSet
 
tokenImage - Variable in exception org.gcn.plinguacore.parser.input.plingua.ParseException
This is a reference to the "tokenImage" array of the generated parser within which the parse error occurred.
tokenImage - Static variable in interface org.gcn.plinguacore.parser.input.plingua.PlinguaJavaCcParserConstants
 
toString() - Method in class org.gcn.plinguacore.parser.input.messages.InputParserAbstractMsg
 
toString() - Method in class org.gcn.plinguacore.parser.input.messages.InputParserDecoratorMsg
 
toString() - Method in class org.gcn.plinguacore.parser.input.messages.MsgInterval
 
toString() - Method in class org.gcn.plinguacore.simulator.cellLike.stochastic.StochasticSimulator.Reaction
 
toString() - Method in class org.gcn.plinguacore.simulator.CreateSimulator
 
toString() - Method in class org.gcn.plinguacore.util.GeneString
 
toString() - Method in class org.gcn.plinguacore.util.HashMultiSet
 
toString() - Method in class org.gcn.plinguacore.util.IndexedPriorityQueue.Node
 
toString() - Method in class org.gcn.plinguacore.util.IndexedPriorityQueue
 
toString() - Method in class org.gcn.plinguacore.util.InmutableMultiSet
 
toString() - Method in class org.gcn.plinguacore.util.Pair
 
toString() - Method in class org.gcn.plinguacore.util.psystem.ActivationSets
 
toString() - Method in class org.gcn.plinguacore.util.psystem.AlphabetObject
 
toString() - Method in class org.gcn.plinguacore.util.psystem.cellLike.CellLikePsystem
 
toString() - Method in class org.gcn.plinguacore.util.psystem.cellLike.membrane.CellLikeMembrane
Gets a String with a representation of the membrane in P-Lingua format
toString() - Method in class org.gcn.plinguacore.util.psystem.Configuration
 
toString() - Method in class org.gcn.plinguacore.util.psystem.Label
 
toString() - Method in class org.gcn.plinguacore.util.psystem.membrane.Membrane
 
toString() - Method in class org.gcn.plinguacore.util.psystem.Psystem
 
toString() - Method in class org.gcn.plinguacore.util.psystem.rule.cellLike.CellLikeRule
 
toString() - Method in class org.gcn.plinguacore.util.psystem.rule.cellLike.ConstantCellLikeRule
 
toString() - Method in class org.gcn.plinguacore.util.psystem.rule.cellLike.PriorityCellLikeRule
 
toString() - Method in class org.gcn.plinguacore.util.psystem.rule.HandRule
 
toString() - Method in class org.gcn.plinguacore.util.psystem.rule.OuterRuleMembrane
 
toString() - Method in class org.gcn.plinguacore.util.psystem.rule.RightHandRule
 
toString() - Method in class org.gcn.plinguacore.util.psystem.rule.Rule
 
toString() - Method in class org.gcn.plinguacore.util.psystem.rule.RulesSet
 
TransitionCreateSimulator - Class in org.gcn.plinguacore.simulator.cellLike.transition
 
TransitionCreateSimulator(String) - Constructor for class org.gcn.plinguacore.simulator.cellLike.transition.TransitionCreateSimulator
 
TransitionPsystemFactory - Class in org.gcn.plinguacore.simulator.cellLike.transition
This class is intended to give support for P-systems in which only membrane communication, evolution and cooperation are allowed
TransitionSimulator - Class in org.gcn.plinguacore.simulator.cellLike.transition
A simulator for transition and symport/antiport P systems
TransitionSimulator(Psystem) - Constructor for class org.gcn.plinguacore.simulator.cellLike.transition.TransitionSimulator
 
treeRepresentation(int) - Method in class org.gcn.plinguacore.util.IndexedPriorityQueue.Node
 
Triple<E,T,L> - Class in org.gcn.plinguacore.util
This class represents a triple of generic types E, T and L
Triple(E, T, L) - Constructor for class org.gcn.plinguacore.util.Triple
 

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