Simulating Population Dynamics P Systems with Proportional Object Distribution
From The P-Lingua Website
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Population Dynamics P systems (PDP systems, in short) refer to a formal framework for ecological modelling. The semantics of the model associates probabilities with rules, but the rules are also applied in a maximally parallel way. | Population Dynamics P systems (PDP systems, in short) refer to a formal framework for ecological modelling. The semantics of the model associates probabilities with rules, but the rules are also applied in a maximally parallel way. | ||
| - | This webpage includes all the material used in the paper [http://www.gcn.us.es/10BWMC/10BWMCvolII/papers/dcba.pdf DCBA: Simulating population dynamics P systems with proportional object distribution]. The paper introduces the Direct distribution based on Consistent Blocks Algorithm (DCBA), a simulation algorithm which address | + | This webpage includes all the material used in the paper [http://www.gcn.us.es/10BWMC/10BWMCvolII/papers/dcba.pdf DCBA: Simulating population dynamics P systems with proportional object distribution]. The paper introduces the Direct distribution based on Consistent Blocks Algorithm (DCBA), a simulation algorithm which address the inherent non-determinism of the models by distributing proportionally the resources. A model for the Bearded Vulture ecosystem has been used as example. |
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| + | == Materials == | ||
| + | * [[pLinguaCore 3.0]] | ||
| + | * [[Media:Bearded_vulture_BWMC12.pli|The bearded vulture model in P-Lingua format]] | ||
| + | * [[Media:SimulationWorkflowDCBA.java|The source code of the simulation workflow]] | ||
| + | * [[Media:SimulationWorkflow.jar|The simulation workflow jar file]] (with all dependencies included) | ||
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| + | == Instructions== | ||
| + | # Put the files [[Media:SimulationWorkflow.jar|SimulationWorkflow.jar]] and [[Media:Bearded_vulture_BWMC12.pli|Bearded_vulture_BWMC12.pli]] in a folder. | ||
| + | # From the command-line, navigate to the folder and write: '''java -jar SimulationWorkflow.jar''' (a Java Runtime Environment is needed) | ||
Current revision
Population Dynamics P systems (PDP systems, in short) refer to a formal framework for ecological modelling. The semantics of the model associates probabilities with rules, but the rules are also applied in a maximally parallel way.
This webpage includes all the material used in the paper DCBA: Simulating population dynamics P systems with proportional object distribution. The paper introduces the Direct distribution based on Consistent Blocks Algorithm (DCBA), a simulation algorithm which address the inherent non-determinism of the models by distributing proportionally the resources. A model for the Bearded Vulture ecosystem has been used as example.
Materials
- pLinguaCore 3.0
- The bearded vulture model in P-Lingua format
- The source code of the simulation workflow
- The simulation workflow jar file (with all dependencies included)
Instructions
- Put the files SimulationWorkflow.jar and Bearded_vulture_BWMC12.pli in a folder.
- From the command-line, navigate to the folder and write: java -jar SimulationWorkflow.jar (a Java Runtime Environment is needed)
